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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs5998366 chr22:32665525 C/T LOC150381 chr22:46449726-46454400:+ 0.59 7.04 6.87E-12 Box Plot
THCA rs5998366 chr22:32665525 C/T LOC284900 chr22:28315364-28404267:+ 0.47 6.32 5.89E-10 Box Plot
THCA rs5998366 chr22:32665525 C/T LOC646851 chr22:38974125-39052634:- 0.5 6.84 2.5E-11 Box Plot
THCA rs5998366 chr22:32665525 C/T LZTR1 chr22:21333751-21353327:+ 0.74 8.3 1.09E-15 Box Plot
THCA rs5998366 chr22:32665525 C/T MAPK1 chr22:22108789-22221970:- 0.5 7.13 3.84E-12 Box Plot
THCA rs5998366 chr22:32665525 C/T MCAT chr22:43528212-43539400:- 0.62 8.39 5.45E-16 Box Plot
THCA rs5998366 chr22:32665525 C/T MED15 chr22:20850200-20941919:+ 0.49 7.33 9.73E-13 Box Plot
THCA rs5998366 chr22:32665525 C/T MICALL1 chr22:38301664-38338829:+ 0.57 6.8 3.09E-11 Box Plot
THCA rs5998366 chr22:32665525 C/T MKL1 chr22:40806285-41032706:- 0.71 8.23 1.8E-15 Box Plot
THCA rs5998366 chr22:32665525 C/T MORC2 chr22:31321117-31364284:- 0.68 6.81 2.99E-11 Box Plot
THCA rs5998366 chr22:32665525 C/T MPST chr22:37415676-37425863:+ 0.52 6.57 1.34E-10 Box Plot
THCA rs5998366 chr22:32665525 C/T MRPL40 chr22:19419425-19423598:+ 0.53 6.5 1.98E-10 Box Plot
THCA rs5998366 chr22:32665525 C/T MTMR3 chr22:30279144-30426855:+ 0.65 7.65 1.14E-13 Box Plot
THCA rs5998366 chr22:32665525 C/T MTP18 chr22:30805176-30825041:+ 0.65 7.4 6.03E-13 Box Plot
THCA rs5998366 chr22:32665525 C/T NCAPH2 chr22:50946645-50961901:+ 0.66 7.67 9.94E-14 Box Plot